Part 4 - Visualising Particle Tracks#
When running neutronics simulations we may want to track how particles travel through the defined geometry.
This python notebook allows users to generate particle track files that can be opened and viewed alongside the 3D geometry.
First import OpenMC and configure the nuclear data path
import openmc
from pathlib import Path
# Setting the cross section path to the correct location in the docker image.
# If you are running this outside the docker image you will have to change this path to your local cross section path.
openmc.config['cross_sections'] = Path.home() / 'nuclear_data' / 'cross_sections.xml'
This first code block makes a geometry with hemispheres. One side is a moderator (H2O) and the other is a material that is quite transparent to neutrons (zirconium).
Because of the different neutronic properties of the materials, we expect neutrons to track differently through the two materials. We can visualise this using OpenMC.
# MATERIALS
mats = openmc.Materials()
moderating_material = openmc.Material(42, "water") # water contains hydrogen which is a good neutron moderator, note the ID number is 42, we need this later
moderating_material.add_element('H', 2, 'ao') # Note, 'percent_type=' does not have to be written to specify 'ao' or 'wo'
moderating_material.add_element('O', 1, 'ao')
moderating_material.set_density('g/cm3', 1.0)
mats.append(moderating_material)
transparent_material = openmc.Material(82, "zirconium") # one of the more transparent materials, note the ID number is 42, we need this later
transparent_material.add_element('Zr', 1, 'ao')
transparent_material.set_density('g/cm3', 6.49)
mats.append(transparent_material)
# GEOMETRY
sph0 = openmc.Sphere(r=400)
sph1 = openmc.Sphere(r=600, boundary_type='vacuum')
flat_surf = openmc.YPlane(y0=0)
simple_moderator_cell = openmc.Cell(region=+sph0 & -sph1 & +flat_surf)
simple_moderator_cell.fill = moderating_material
simple_transparent_cell = openmc.Cell(region=+sph0 & -sph1 & -flat_surf)
simple_transparent_cell.fill = transparent_material
vaccum_cell = openmc.Cell(region=-sph0)
geom = openmc.Geometry([simple_moderator_cell, simple_transparent_cell, vaccum_cell])
# SIMULATION SETTINGS
# Instantiate a Settings object
sett = openmc.Settings()
batches = 1
sett.batches = batches
sett.inactive = 0
sett.particles = 10 # Note that only 10 particles are simulated, otherwise we make too many files
sett.particle = "neutron"
sett.run_mode = 'fixed source'
# creates a 14MeV point source
source = openmc.IndependentSource()
source.space = openmc.stats.Point((0, 0, 0))
source.angle = openmc.stats.Isotropic()
source.energy = openmc.stats.Discrete([14e6], [1])
# source.file = 'source_1000_particles.h5'
sett.source = source
This is the new part covered by this task. The running of OpenMC in track mode.
# Run OpenMC!
model = openmc.model.Model(geom, mats, sett)
model.run(tracks=True) # this creates h5 files that contain track information
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| The OpenMC Monte Carlo Code
Copyright | 2011-2025 MIT, UChicago Argonne LLC, and contributors
License | https://docs.openmc.org/en/latest/license.html
Version | 0.15.3-dev144
Commit Hash | 14ab4d3b6f3d77b73e8bb480782bbe1bdd56483d
Date/Time | 2025-05-14 13:52:57
OpenMP Threads | 16
Reading model XML file 'model.xml' ...
Reading cross sections XML file...
Reading H1 from /home/jon/nuclear_data/neutron/H1.h5
Reading H2 from /home/jon/nuclear_data/neutron/H2.h5
Reading O16 from /home/jon/nuclear_data/neutron/O16.h5
Reading O17 from /home/jon/nuclear_data/neutron/O17.h5
Reading O18 from /home/jon/nuclear_data/neutron/O18.h5
Reading Zr90 from /home/jon/nuclear_data/neutron/Zr90.h5
Reading Zr91 from /home/jon/nuclear_data/neutron/Zr91.h5
Reading Zr92 from /home/jon/nuclear_data/neutron/Zr92.h5
Reading Zr94 from /home/jon/nuclear_data/neutron/Zr94.h5
Reading Zr96 from /home/jon/nuclear_data/neutron/Zr96.h5
WARNING: Negative value(s) found on probability table for nuclide Zr96 at 294K
Minimum neutron data temperature: 294.0 K
Maximum neutron data temperature: 294.0 K
Preparing distributed cell instances...
Writing summary.h5 file...
Maximum neutron transport energy: 20000000.0 eV for H1
===============> FIXED SOURCE TRANSPORT SIMULATION <===============
Simulating batch 1
Creating state point statepoint.1.h5...
=======================> TIMING STATISTICS <=======================
Total time for initialization = 5.0548e-01 seconds
Reading cross sections = 4.9954e-01 seconds
Total time in simulation = 4.0216e-03 seconds
Time in transport only = 2.4194e-03 seconds
Time in active batches = 4.0216e-03 seconds
Time accumulating tallies = 8.5100e-07 seconds
Time writing statepoints = 1.5910e-03 seconds
Total time for finalization = 2.4433e-04 seconds
Total time elapsed = 5.1161e-01 seconds
Calculation Rate (active) = 2486.56 particles/second
============================> RESULTS <============================
WARNING: Could not compute uncertainties -- only one active batch simulated!
Leakage Fraction = 0.00000
PosixPath('/home/jon/neutronics-workshop/tasks/task_04_make_sources/statepoint.1.h5')
Loading the track output file and plotting the results
tracks = openmc.Tracks('tracks.h5')
Makes a quick 3D plot of the tracks.
tracks.plot()
<Axes3D: xlabel='x [cm]', ylabel='y [cm]', zlabel='z [cm]'>
This exports the tracks.h5 files to vtk / vtp files which can be opened with Paraview to show the tracks in 3d.
tracks.write_to_vtk('tracks.vtp')
<PolyData(0x1fce79f0) at 0x7823f0ae3fa0>
Cycles through each of the tracks printing information on each track
# gets the first track from the 10 tracks. This is 10 because we simulated 10 particles
track = tracks[0]
# get the primary particle track from this particle
one_particle = track.particle_tracks[0]
# prints out the x position, y position, z position, x direction, y direction, z direction, energy, weight (varience reduction is off), cell id and material id
print(one_particle.states)
# Notice the energy starts at 14MeV and decreases with each collision
[(( 0. , 0. , 0. ), (-0.66165219, 0.7456147 , 7.92154954e-02), 1.40000000e+07, 0.00000000e+00, 1., 3, 0, -1)
((-264.66087519, 298.24588176, 31.68619815), (-0.66165219, 0.7456147 , 7.92154954e-02), 1.40000000e+07, 7.81511637e-08, 1., 1, 0, 42)
((-265.39525145, 299.0734491 , 31.77412045), (-0.02368145, 0.9423578 , -3.33767825e-01), 6.69506077e+06, 7.83680161e-08, 1., 1, 0, 42)
((-265.43482482, 300.64819511, 31.216371 ), ( 0.11755527, -0.59746849, -7.93228948e-01), 5.68047779e+06, 7.88374307e-08, 1., 1, 0, 42)
((-265.23722523, 299.64390555, 29.88302612), (-0.10197062, 0.737343 , 6.67777874e-01), 4.42245693e+06, 7.93496332e-08, 1., 1, 0, 42)
((-265.54815923, 301.89224932, 31.91924836), (-0.2746274 , 0.96148452, -1.12833934e-02), 2.35113587e+06, 8.04016389e-08, 1., 1, 0, 42)
((-267.34513686, 308.18355959, 31.8454174 ), ( 0.48526355, 0.43978064, -7.55719710e-01), 2.07080652e+05, 8.34926577e-08, 1., 1, 0, 42)
((-266.93289416, 308.5571635 , 31.20341588), ( 0.78710401, -0.54004784, -2.98019469e-01), 2.82004988e+04, 8.48425687e-08, 1., 1, 0, 42)
((-266.28433184, 308.11217189, 30.95785215), ( 0.9503871 , -0.01688664, -3.10611000e-01), 2.03533276e+04, 8.83901208e-08, 1., 1, 0, 42)
((-265.34285018, 308.09544349, 30.65015167), ( 0.95166261, -0.08317997, 2.95667669e-01), 1.34742085e+04, 9.34104071e-08, 1., 1, 0, 42)
((-263.67734888, 307.94987053, 31.1675986 ), ( 0.83493005, -0.44985145, -3.17057535e-01), 7.33017711e+03, 1.04310817e-07, 1., 1, 0, 42)
((-263.45565989, 307.83042686, 31.0834141 ), ( 0.30703382, 0.33646378, -8.90237251e-01), 1.06844725e+03, 1.06552980e-07, 1., 1, 0, 42)
((-263.1745102 , 308.13852545, 30.26822724), ( 0.58106134, -0.14601441, -8.00654425e-01), 7.60793193e+02, 1.26806618e-07, 1., 1, 0, 42)
((-262.71764158, 308.02371933, 29.63870012), (-0.11643885, -0.01341688, -9.93107236e-01), 4.11379605e+02, 1.47415959e-07, 1., 1, 0, 42)
((-262.74248184, 308.02085706, 29.42683749), (-0.23540721, 0.62329945, -7.45708550e-01), 2.41305629e+02, 1.55020356e-07, 1., 1, 0, 42)
((-263.10750489, 308.98734685, 28.27053982), (-0.19036982, -0.05091422, -9.80391287e-01), 1.34760762e+02, 2.27188360e-07, 1., 1, 0, 42)
((-263.11019279, 308.98662797, 28.25669731), ( 0.04430585, 0.40745156, -9.12151422e-01), 1.00156404e+02, 2.28067710e-07, 1., 1, 0, 42)
((-263.09740178, 309.10425847, 27.99336092), (-0.60028273, 0.14039739, -7.87368541e-01), 5.71520489e+01, 2.48923778e-07, 1., 1, 0, 42)
((-263.47465428, 309.19249234, 27.49853284), (-0.60071573, 0.77922728, 1.78732950e-01), 6.39713690e+00, 3.09025678e-07, 1., 1, 0, 42)
((-264.07523319, 309.97154215, 27.67722508), (-0.48319168, 0.145283 , 8.63376306e-01), 2.15669859e-01, 5.94808466e-07, 1., 1, 0, 42)
((-264.1979057 , 310.00842654, 27.8964187 ), (-0.40638249, 0.90736305, -1.07450265e-01), 2.28547949e-01, 9.90048436e-07, 1., 1, 0, 42)
((-265.06112707, 311.93581071, 27.66817716), ( 0.24177391, 0.29432016, 9.24619393e-01), 2.07999214e-01, 4.20242422e-06, 1., 1, 0, 42)
((-264.90762567, 312.12267353, 28.25521474), (-0.6249374 , 0.53183696, 5.71491642e-01), 8.10302434e-02, 5.20889200e-06, 1., 1, 0, 42)
((-265.23354403, 312.400038 , 28.55325998), ( 0.53994487, -0.23277276, 8.08873523e-01), 7.05488694e-02, 6.53346697e-06, 1., 1, 0, 42)
((-264.75149688, 312.19222522, 29.27539884), ( 0.45835907, 0.81070744, 3.64225767e-01), 1.76136915e-02, 8.96355989e-06, 1., 1, 0, 42)
((-264.7423384 , 312.20842397, 29.28267644), (-0.24260751, 0.96811484, -6.24118901e-02), 1.12952107e-02, 9.07240778e-06, 1., 1, 0, 42)
((-264.78948916, 312.39657705, 29.27054669), (-0.70936802, 0.14993454, -6.88706506e-01), 2.05599763e-02, 1.03945102e-05, 1., 1, 0, 42)
((-264.8252797 , 312.40414186, 29.23579862), ( 0.31413946, 0.72205172, 6.16407103e-01), 5.45109123e-02, 1.06489078e-05, 1., 1, 0, 42)
((-264.55103498, 313.03449524, 29.77392391), ( 0.07188311, 0.93464535, -3.48239713e-01), 4.63435114e-02, 1.33522552e-05, 1., 1, 0, 42)
((-264.52277583, 313.401929 , 29.63702169), ( 0.6251982 , -0.20809795, -7.52211712e-01), 5.44758946e-02, 1.46725337e-05, 1., 1, 0, 42)
((-264.14026766, 313.27461071, 29.17680422), ( 0.92319488, -0.3469607 , -1.65316302e-01), 5.87054731e-02, 1.65677057e-05, 1., 1, 0, 42)
((-263.81438881, 313.15213694, 29.11844917), (-0.31788232, 0.31029682, 8.95916688e-01), 5.08494069e-02, 1.76210039e-05, 1., 1, 0, 42)
((-263.82020267, 313.15781206, 29.1348349 ), (-0.63941578, 0.68726456, -3.44695338e-01), 6.40983611e-03, 1.76796424e-05, 1., 1, 0, 42)
((-263.89589479, 313.23916838, 29.0940309 ), (-0.13806876, -0.98427378, -1.10191357e-01), 9.39683576e-02, 1.87486276e-05, 1., 1, 0, 42)
((-263.91931422, 313.07221439, 29.07534008), (-0.75330427, -0.58174062, 3.06774404e-01), 3.98147348e-02, 1.91486809e-05, 1., 1, 0, 42)
((-263.92461185, 313.06812329, 29.07749747), ( 0.89773343, 0.12329004, -4.22935275e-01), 6.45987610e-02, 1.91741620e-05, 1., 1, 0, 42)
((-263.53192672, 313.12205262, 28.8924978 ), ( 0.30148454, 0.20772162, 9.30569073e-01), 1.20700608e-02, 2.04184266e-05, 1., 1, 0, 42)
((-263.47967144, 313.1580563 , 29.05379013), ( 0.53669441, 0.80745296, 2.44905755e-01), 1.24809854e-02, 2.15590393e-05, 1., 1, 0, 42)
((-263.34381405, 313.36245278, 29.11578492), (-0.77543949, -0.57179832, 2.67843758e-01), 2.08531388e-02, 2.31972115e-05, 1., 1, 0, 42)
((-263.87874663, 312.96800091, 29.30055544), (-0.72183201, -0.3885815 , 5.72680507e-01), 1.67436904e-02, 2.66509801e-05, 1., 1, 0, 42)
((-264.60443402, 312.57734395, 29.87629469), (-0.45961316, 0.61422638, -6.41468388e-01), 2.40269062e-02, 3.22681254e-05, 1., 1, 0, 42)
((-264.607944 , 312.58203468, 29.87139592), (-0.66910004, 0.466144 , -5.78804719e-01), 1.38196717e-02, 3.23037451e-05, 1., 1, 0, 42)
((-265.18932375, 312.98706632, 29.3684736 ), ( 0.26410011, -0.0382065 , -9.63738241e-01), 1.81288585e-02, 3.76475156e-05, 1., 1, 0, 42)
((-265.02720159, 312.96361264, 28.77686716), ( 0.37197372, 0.90390436, -2.11169257e-01), 3.32110725e-03, 4.09437370e-05, 1., 1, 0, 42)
((-264.69668456, 313.76677633, 28.58923284), (-0.48584253, 0.82006177, 3.02416501e-01), 6.85725168e-03, 5.20909924e-05, 1., 1, 0, 42)
((-264.74400791, 313.84665421, 28.61868963), (-0.60115823, 0.63913087, -4.79708774e-01), 5.96204096e-03, 5.29414109e-05, 1., 1, 0, 42)
((-265.06913161, 314.19231462, 28.35924929), (-0.84898694, -0.22314939, -4.78983842e-01), 6.08851079e-03, 5.80053698e-05, 1., 1, 0, 42)
((-265.20019132, 314.15786663, 28.28530766), (-0.75895324, 0.50838224, 4.06862970e-01), 1.66125447e-02, 5.94357137e-05, 1., 1, 0, 42)
((-265.3005106 , 314.22506515, 28.33908726), (-0.63487058, 0.25002124, -7.31046319e-01), 4.57583674e-02, 6.01771589e-05, 1., 1, 0, 42)
((-265.392814 , 314.26141557, 28.23280094), ( 0.37397179, 0.73086248, 5.70951082e-01), 3.76341677e-02, 6.06685475e-05, 1., 1, 0, 42)
((-265.06247297, 314.90700935, 28.73713996), ( 0.06864288, 0.7072959 , 7.03577047e-01), 3.61413098e-02, 6.39605513e-05, 1., 1, 0, 42)
((-265.03928962, 315.1458905 , 28.97476511), ( 0.29572767, 0.92958269, 2.20048098e-01), 3.01262961e-02, 6.52449699e-05, 1., 1, 0, 42)
((-264.88108817, 315.64317684, 29.09248127), (-0.92838856, 0.09712574, -3.58693850e-01), 4.49165231e-02, 6.74732688e-05, 1., 1, 0, 42)
((-265.28103845, 315.68501866, 28.93795577), (-0.40726295, 0.3472521 , -8.44720586e-01), 5.58256348e-02, 6.89428750e-05, 1., 1, 0, 42)
((-265.754447 , 316.08866971, 27.95603991), (-0.61065122, 0.44649719, 6.54022429e-01), 6.17912272e-02, 7.24997793e-05, 1., 1, 0, 42)
((-266.03201016, 316.2916189 , 28.25331686), (-0.25593566, 0.03441276, 9.66081105e-01), 1.27153292e-02, 7.38217839e-05, 1., 1, 0, 42)
((-266.09113238, 316.29956839, 28.47648567), (-0.42383857, 0.49269362, -7.60009117e-01), 2.69710188e-02, 7.53028824e-05, 1., 1, 0, 42)
((-266.60609157, 316.89818571, 27.55308298), ( 0.3482949 , 0.68805613, -6.36607744e-01), 1.33934074e-02, 8.06516222e-05, 1., 1, 0, 42)
((-265.96700838, 318.16069375, 26.38497713), ( 0.29773554, 0.53559921, -7.90244918e-01), 1.48351510e-02, 9.21144707e-05, 1., 1, 0, 42)
((-265.92086769, 318.24369664, 26.26251127), ( 0.06317631, -0.65924037, -7.49273576e-01), 2.54270809e-02, 9.30343591e-05, 1., 1, 0, 42)
((-265.91723287, 318.20576748, 26.21940208), ( 0.91901762, -0.38431756, 8.77873426e-02), 5.94800623e-02, 9.32952200e-05, 1., 1, 0, 42)
((-265.71936897, 318.12302416, 26.23830263), (-0.59283922, -0.32779564, 7.35589341e-01), 4.13527987e-02, 9.39334612e-05, 1., 1, 0, 42)
((-265.75256394, 318.10466983, 26.27949064), ( 0.23614954, 0.22876604, 9.44404307e-01), 5.72792731e-02, 9.41325334e-05, 1., 1, 0, 42)
((-265.57617454, 318.27554421, 26.98490345), ( 0.24316655, 0.12334052, 9.62110775e-01), 6.56525767e-02, 9.63889249e-05, 1., 1, 0, 42)
((-265.52521205, 318.30139373, 27.18654121), (-0.28968931, -0.1212198 , 9.49413432e-01), 9.63131412e-02, 9.69802805e-05, 1., 1, 0, 42)
((-265.78358554, 318.19327796, 28.03332172), (-0.09380411, 0.47928632, -8.72631315e-01), 9.59931578e-02, 9.90580651e-05, 1., 1, 0, 42)
((-265.86861096, 318.62771014, 27.24235586), (-0.77971205, 0.14873779, -6.08215580e-01), 1.34013537e-01, 1.01173183e-04, 1., 1, 0, 42)
((-266.33454631, 318.71659191, 26.87890228), (-0.51242444, -0.4460112 , -7.33822329e-01), 8.10122858e-02, 1.02353354e-04, 1., 1, 0, 42)
((-266.48878118, 318.58234679, 26.65802875), (-0.03533771, 0.56945961, -8.21259395e-01), 6.76706095e-02, 1.03117903e-04, 1., 1, 0, 42)
((-266.52242701, 319.12454213, 25.87608917), (-0.70567654, -0.65200297, -2.77331491e-01), 1.31035090e-02, 1.05764090e-04, 1., 1, 0, 42)
((-266.94475402, 318.7343372 , 25.71011429), (-0.78353578, -0.43187356, 4.46717930e-01), 3.38019978e-02, 1.09543963e-04, 1., 1, 0, 42)
((-268.57841386, 317.83388758, 26.64151418), ( 0.74663532, -0.62388752, 2.30868036e-01), 2.82518557e-03, 1.17742935e-04, 1., 1, 0, 42)
((-268.57707816, 317.83277147, 26.64192719), ( 0.04749318, -0.99881116, -1.09848578e-02), 5.57090909e-02, 1.17767269e-04, 1., 1, 0, 42)
((-268.56590574, 317.59780841, 26.63934309), (-0.31163758, -0.68151616, 6.62131206e-01), 8.87855642e-02, 1.18487847e-04, 1., 1, 0, 42)
((-268.59954893, 317.52423456, 26.71082421), ( 0.47113839, -0.8709009 , -1.39857956e-01), 1.96903493e-02, 1.18749788e-04, 1., 1, 0, 42)
((-268.47448699, 317.29305716, 26.67369944), ( 0.93552842, -0.3476725 , 6.25333051e-02), 9.94900506e-03, 1.20117447e-04, 1., 1, 0, 42)
((-268.4731629 , 317.29256508, 26.67378794), (-0.22024533, -0.7456728 , -6.28859339e-01), 7.21913216e-03, 1.20127706e-04, 1., 1, 0, 42)
((-268.60370177, 316.85060663, 26.30106455), (-0.78644275, 0.59468019, -1.66922945e-01), 3.47945273e-03, 1.25171048e-04, 1., 1, 0, 42)
((-268.60913818, 316.85471744, 26.29991067), (-0.16730177, 0.76591824, 6.20789313e-01), 6.67969484e-03, 1.25255774e-04, 1., 1, 0, 42)
((-268.76702536, 317.5775351 , 26.88576625), (-0.2761545 , -0.85517497, 4.38650727e-01), 6.91662528e-02, 1.33604032e-04, 1., 1, 0, 42)
((-268.81050142, 317.44290163, 26.95482471), (-0.8717259 , -0.10654487, -4.78269958e-01), 1.65585108e-01, 1.34036823e-04, 1., 1, 0, 42)
((-268.90407301, 317.43146504, 26.90348693), (-0.03899345, 0.82430689, -5.64798781e-01), 1.97372249e-02, 1.34227537e-04, 1., 1, 0, 42)
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((-282.86103685, 337.52906713, 22.17114894), ( 0.00555408, -0.95321717, -3.02235300e-01), 2.28254249e-02, 7.97416283e-04, 1., 1, 0, 42)
((-282.85851366, 337.09602595, 22.03384515), (-0.52612898, -0.79642535, -2.98152571e-01), 2.92585962e-02, 7.99590264e-04, 1., 1, 0, 42)
((-282.88092965, 337.06209384, 22.02114221), ( 0.8640836 , -0.01151552, 5.03216581e-01), 2.35219633e-02, 7.99770345e-04, 1., 1, 0, 42)
((-282.71744459, 337.0599151 , 22.11635104), ( 0.25446385, 0.34803073, 9.02287515e-01), 2.76588130e-02, 8.00662239e-04, 1., 1, 0, 42)
((-282.70113629, 337.08222 , 22.17417763), (-0.39688682, 0.78621305, 4.73655872e-01), 6.29779507e-02, 8.00940847e-04, 1., 1, 0, 42)
((-282.70186093, 337.08365547, 22.17504243), (-0.67766746, 0.48641074, 5.51517367e-01), 4.06627068e-03, 8.00946107e-04, 1., 1, 0, 42)
((-282.75583643, 337.12239757, 22.21897021), ( 0.68078822, 0.67704683, 2.79526354e-01), 5.26219764e-02, 8.01849153e-04, 1., 1, 0, 42)
((-282.11790226, 337.75682587, 22.48090103), (-0.97370807, -0.2277661 , 3.89751494e-03), 2.50223984e-03, 8.04802456e-04, 1., 1, 0, 42)
((-282.15150432, 337.7489658 , 22.48103553), (-0.12717473, 0.86758128, -4.80759104e-01), 7.27699644e-02, 8.05301226e-04, 1., 1, 0, 42)
((-282.26934301, 338.55285696, 22.03556949), ( 0.36169071, -0.20611348, -9.09228828e-01), 6.60970578e-02, 8.07784581e-04, 1., 1, 0, 42)
((-282.17429673, 338.49869378, 21.79663933), (-0.38435889, 0.09887859, -9.17873230e-01), 4.82317927e-03, 8.08523564e-04, 1., 1, 0, 42)
((-282.24450229, 338.51675457, 21.62898404), (-0.90943989, -0.37037121, 1.89061506e-01), 1.36852371e-02, 8.10425061e-04, 1., 1, 0, 42)
((-282.72962744, 338.31918639, 21.72983567), ( 0.52723625, 0.71127618, -4.64874321e-01), 7.71434318e-02, 8.13721777e-04, 1., 1, 0, 42)
((-282.67216602, 338.3967056 , 21.67917083), ( 0.45425849, 0.76657403, -4.53887082e-01), 8.82263625e-02, 8.14005470e-04, 1., 1, 0, 42)
((-282.19818576, 339.19656067, 21.2055781 ), (-0.49414917, -0.78005971, -3.83827367e-01), 2.89684669e-02, 8.16545190e-04, 1., 1, 0, 42)
((-282.38296948, 338.90486265, 21.06204847), ( 0.1758145 , 0.10683938, -9.78608507e-01), 7.93606639e-02, 8.18133630e-04, 1., 1, 0, 42)
((-282.30451071, 338.95254066, 20.6253358 ), ( 0.20146788, -0.96359605, -1.75765003e-01), 1.56954554e-02, 8.19278911e-04, 1., 1, 0, 42)
((-282.2086645 , 338.49412005, 20.54171747), (-0.36548737, -0.92372102, 1.14710287e-01), 1.29539055e-02, 8.22024338e-04, 1., 1, 0, 42)
((-282.22404367, 338.45525123, 20.54654431), (-0.9982102 , -0.04711748, 3.68284266e-02), 5.05941657e-02, 8.22291631e-04, 1., 1, 0, 42)
((-282.61075679, 338.43699761, 20.56081188), (-0.93158728, 0.36351758, -3.46928762e-04), 4.37114897e-02, 8.23536847e-04, 1., 1, 0, 42)
((-283.19411095, 338.66463006, 20.56059463), (-0.78410247, 0.08365619, -6.14967446e-01), 6.77100340e-02, 8.25702250e-04, 1., 1, 0, 42)
((-283.4898676 , 338.69618445, 20.32863425), (-0.97592195, -0.12615376, 1.77936998e-01), 2.13004204e-02, 8.26750254e-04, 1., 1, 0, 42)
((-283.62232099, 338.6790627 , 20.35278408), ( 0.99350971, 0.10360979, 4.69411218e-02), 1.04809140e-02, 8.27422583e-04, 1., 1, 0, 42)
((-283.60765438, 338.68059223, 20.35347705), ( 0.93410737, 0.32331163, 1.51370417e-01), 8.61750193e-03, 8.27526835e-04, 1., 1, 0, 42)
((-283.42749435, 338.74294891, 20.38267166), (-0.75656492, 0.51526741, 4.02627653e-01), 1.49646009e-02, 8.29028935e-04, 1., 1, 0, 42)
((-284.18101409, 339.25614236, 20.78367873), (-0.54282851, 0.72112171, 4.30488887e-01), 3.91925246e-02, 8.34915252e-04, 1., 1, 0, 42)
((-284.50244055, 339.68314205, 21.03858524), ( 0.65899991, -0.66989597, -3.41991970e-01), 3.87338176e-02, 8.37077698e-04, 1., 1, 0, 42)
((-284.25139349, 339.42794411, 20.90830286), (-0.5850982 , -0.54003205, -6.05000400e-01), 1.83404698e-01, 8.38477132e-04, 1., 1, 0, 42)
((-284.56714112, 339.13651638, 20.58181502), (-0.83042141, 0.55002114, 8.87526069e-02), 5.17961750e-02, 8.39388164e-04, 1., 1, 0, 42)
((-284.71917151, 339.23721216, 20.59806351), (-0.95376994, 0.22514013, 1.99084962e-01), 3.50158766e-02, 8.39969746e-04, 1., 1, 0, 42)
((-286.14174303, 339.57301425, 20.89500367), (-0.07060916, 0.96581844, -2.49417506e-01), 4.90078471e-02, 8.45732443e-04, 1., 1, 0, 42)
((-286.1946678 , 340.29693897, 20.70805394), ( 0.76350233, -0.40767478, 5.00864716e-01), 1.35344800e-02, 8.48180339e-04, 1., 1, 0, 42)
((-284.07952415, 339.16755052, 22.09560808), ( 0.22538272, -0.11106517, -9.67918984e-01), 2.05238396e-02, 8.65396508e-04, 1., 1, 0, 42)
((-284.03259174, 339.14442294, 21.89405414), ( 0.01365126, 0.08516441, -9.96273389e-01), 1.89229794e-02, 8.66447383e-04, 1., 1, 0, 42)
((-284.02745467, 339.17647091, 21.51914948), ( 0.0298132 , -0.0527292 , -9.98163716e-01), 5.66862876e-02, 8.68425151e-04, 1., 1, 0, 42)
((-284.02644283, 339.17468131, 21.48527239), ( 0.79145451, -0.13299168, -5.96584423e-01), 3.56096574e-02, 8.68528211e-04, 1., 1, 0, 42)
((-283.62778588, 339.10769318, 21.18477183), ( 0.99078892, -0.13523057, 7.07215263e-03), 8.73656646e-02, 8.70458034e-04, 1., 1, 0, 42)
((-283.45951329, 339.08472603, 21.18597294), ( 0.45738357, 0.78622663, -4.15509279e-01), 6.48058989e-02, 8.70873456e-04, 1., 1, 0, 42)
((-283.40960217, 339.17052152, 21.14063128), ( 0.60220209, 0.49150191, -6.29109299e-01), 6.84080641e-02, 8.71183367e-04, 1., 1, 0, 42)
((-283.39476969, 339.18262741, 21.12513606), ( 0.01480365, 0.97540376, 2.19928071e-01), 1.66260395e-02, 8.71251451e-04, 1., 1, 0, 42)
((-283.38794829, 339.63208584, 21.2264772 ), (-0.19545131, 0.97941592, -5.04305229e-02), 1.87214635e-02, 8.73835130e-04, 1., 1, 0, 42)
((-283.39736952, 339.67929612, 21.22404632), (-0.39513176, 0.89934455, 1.87217178e-01), 2.85570167e-02, 8.74089829e-04, 1., 1, 0, 42)
((-283.79499991, 340.5843277 , 21.41244737), ( 0.2743499 , 0.35445993, 8.93918504e-01), 4.59835559e-02, 8.78395184e-04, 1., 1, 0, 42)
((-283.71579341, 340.68666245, 21.67052713), (-0.55865367, -0.30025937, 7.73143185e-01), 2.89806541e-02, 8.79368565e-04, 1., 1, 0, 42)
((-284.01221499, 340.52734486, 22.08075682), (-0.31996403, 0.75094673, 5.77669472e-01), 3.81098516e-02, 8.81621978e-04, 1., 1, 0, 42)
((-284.23157154, 341.04216862, 22.47678754), ( 0.59218659, -0.3698282 , 7.15920490e-01), 1.23941485e-02, 8.84160954e-04, 1., 1, 0, 42)
((-284.08922745, 340.95327289, 22.64887359), (-0.13075859, 0.01054205, 9.91358187e-01), 1.05940558e-02, 8.85721945e-04, 1., 1, 0, 42)
((-284.10533629, 340.95457162, 22.77100423), (-0.71525374, -0.53830986, 4.45684405e-01), 1.62820946e-02, 8.86587293e-04, 1., 1, 0, 42)
((-284.12169178, 340.94226226, 22.78119556), ( 0.50225711, -0.70978759, -4.93902188e-01), 6.00854720e-02, 8.86716854e-04, 1., 1, 0, 42)
((-284.04796371, 340.83807006, 22.70869393), ( 0.37276161, -0.53141566, -7.60687965e-01), 7.43665581e-02, 8.87149817e-04, 1., 1, 0, 42)
((-283.74973061, 340.41290358, 22.10009496), ( 0.30552263, -0.23745188, -9.22102233e-01), 1.70208651e-01, 8.89270929e-04, 1., 1, 0, 42)
((-283.58197891, 340.28252713, 21.59380116), (-0.54429651, -0.65322001, -5.26350573e-01), 4.78853780e-02, 8.90233118e-04, 1., 1, 0, 42)
((-283.77263767, 340.05371413, 21.40942859), (-0.87353626, -0.30389076, -3.80243098e-01), 3.75803741e-02, 8.91390422e-04, 1., 1, 0, 42)
((-284.09119559, 339.94289239, 21.27076297), (-0.41353581, -0.65822587, -6.29068233e-01), 5.79489340e-02, 8.92750472e-04, 1., 1, 0, 42)
((-284.6930293 , 338.98495233, 20.35525708), (-0.81967527, -0.55750523, 1.31606841e-01), 2.00661961e-02, 8.97121348e-04, 1., 1, 0, 42)
((-284.91237924, 338.83576064, 20.39047585), (-0.41133112, -0.67756929, 6.09677423e-01), 2.49142661e-02, 8.98487160e-04, 1., 1, 0, 42)
((-284.99816529, 338.69444871, 20.51762845), (-0.3086511 , -0.88237909, 3.55164230e-01), 3.04282401e-02, 8.99442436e-04, 1., 1, 0, 42)
((-285.06744517, 338.49638975, 20.59734867), (-0.67070636, -0.6094497 , -4.22757663e-01), 2.76491768e-02, 9.00372748e-04, 1., 1, 0, 42)
((-285.87895128, 337.75899975, 20.08584252), (-0.73965047, 0.44633279, -5.03690604e-01), 4.02580798e-03, 9.05633479e-04, 1., 1, 0, 42)
((-285.92116696, 337.78447427, 20.05709429), (-0.11895357, 0.99141913, 5.42047842e-02), 5.73580848e-03, 9.06283831e-04, 1., 1, 0, 42)
((-285.93467387, 337.89704769, 20.06324913), (-0.62245504, -0.11569749, -7.74056727e-01), 1.35260241e-02, 9.07367780e-04, 1., 1, 0, 42)
((-286.37038508, 337.81606081, 19.52141851), (-0.49570199, -0.06391711, -8.66137483e-01), 1.49482061e-02, 9.11719225e-04, 1., 1, 0, 42)
((-286.51028576, 337.79802165, 19.27697079), (-0.36813419, 0.184106 , -9.11362826e-01), 2.64443942e-02, 9.13388133e-04, 1., 1, 0, 42)
((-286.67703544, 337.88141411, 18.86416083), (-0.73605814, 0.60174086, 3.10042499e-01), 3.86121806e-02, 9.15401950e-04, 1., 1, 0, 42)
((-286.93257544, 338.09032269, 18.97179943), ( 0.56083771, 0.66020599, 4.99588949e-01), 3.98326687e-02, 9.16679307e-04, 1., 1, 0, 42)
((-286.58300343, 338.50183128, 19.28319488), ( 0.001482 , -0.05393142, -9.98543542e-01), 4.25731735e-02, 9.18937222e-04, 1., 1, 0, 42)
((-286.58280747, 338.49470003, 19.15115928), (-0.65453077, -0.13438462, -7.43996136e-01), 1.64662865e-02, 9.19400545e-04, 1., 1, 0, 42)
((-286.59876999, 338.49142269, 19.1330149 ), (-0.25796113, -0.70432028, 6.61353920e-01), 2.82795333e-03, 9.19537950e-04, 1., 1, 0, 42)
((-286.67589284, 338.28085146, 19.33074044), ( 0.34119407, -0.54685188, -7.64551913e-01), 2.56374908e-03, 9.23602575e-04, 1., 1, 0, 42)
((-286.62903346, 338.20574717, 19.22573736), ( 0.0543084 , -0.79557547, -6.03415502e-01), 4.02124607e-02, 9.25563609e-04, 1., 1, 0, 42)
((-286.58281296, 337.52865305, 18.71218572), (-0.87493914, -0.11028315, -4.71507301e-01), 7.55318170e-02, 9.28632031e-04, 1., 1, 0, 42)
((-286.78830227, 337.50275181, 18.60144691), (-0.75787795, -0.65167788, 3.06096746e-02), 4.46050225e-02, 9.29249869e-04, 1., 1, 0, 42)
((-287.37435463, 336.99882191, 18.62511678), (-0.31117913, 0.48538168, 8.17050901e-01), 2.92977953e-03, 9.31896986e-04, 1., 1, 0, 42)
((-287.51262992, 337.2145057 , 18.98818082), ( 0.49875429, 0.82802582, -2.56158944e-01), 7.40548065e-02, 9.37832310e-04, 1., 1, 0, 42)
((-287.40051205, 337.40064243, 18.93059737), ( 0.46932495, 0.60762124, 6.40726557e-01), 4.71647396e-02, 9.38429537e-04, 1., 1, 0, 42)
((-287.17796262, 337.68877064, 19.23442381), (-0.90591312, -0.06557133, 4.18356100e-01), 3.16263531e-02, 9.40008136e-04, 1., 1, 0, 42)
((-287.32893946, 337.67784272, 19.30414581), ( 0.46377477, -0.34053631, 8.17892403e-01), 4.06788627e-02, 9.40685664e-04, 1., 1, 0, 42)
((-287.13197428, 337.53321692, 19.65150477), ( 0.72666483, -0.17654048, -6.63921440e-01), 4.72321525e-03, 9.42208053e-04, 1., 1, 0, 42)
((-286.75814224, 337.44239584, 19.30995101), (-0.6580338 , -0.66255631, 3.57785759e-01), 1.55357206e-02, 9.47619973e-04, 1., 1, 0, 42)
((-286.85863976, 337.34120761, 19.36459347), ( 0.22937599, 0.12101652, 9.65785512e-01), 3.77615177e-02, 9.48505841e-04, 1., 1, 0, 42)
((-286.85762832, 337.34174124, 19.36885217), (-0.09080726, 0.02930569, -9.95437200e-01), 9.05755409e-02, 9.48522247e-04, 1., 1, 0, 42)
((-286.87391101, 337.34699606, 19.19035988), ( 0.14069037, -0.40461275, -9.03600985e-01), 6.63692878e-02, 9.48953000e-04, 1., 1, 0, 42)
((-286.67763522, 336.78252468, 17.9297548 ), (-0.86050256, 0.03386478, -5.08319302e-01), 2.70335424e-02, 9.52868133e-04, 1., 1, 0, 42)
((-286.71070246, 336.78382603, 17.91022119), (-0.82746407, 0.56084255, 2.75471064e-02), 1.94839273e-02, 9.53037108e-04, 1., 1, 0, 42)
((-287.13021589, 337.06816584, 17.92418721), (-0.54976094, 0.35337568, 7.56894008e-01), 4.42449052e-02, 9.55663057e-04, 1., 1, 0, 42)
((-287.42780609, 337.25945105, 18.33390027), ( 0.53014544, 0.81009407, -2.50386509e-01), 1.73090446e-02, 9.57523605e-04, 1., 1, 0, 42)
((-286.96342731, 337.96904972, 18.11457521), (-0.01247257, 0.46201436, -8.86784733e-01), 4.26435888e-02, 9.62337190e-04, 1., 1, 0, 42)
((-286.96633878, 338.0768979 , 17.90757272), (-0.69699502, 0.03618654, -7.16162330e-01), 2.16678179e-02, 9.63154446e-04, 1., 1, 0, 42)
((-287.02655236, 338.08002406, 17.84570328), ( 0.51820399, 0.02030069, 8.55016083e-01), 2.10103265e-02, 9.63578758e-04, 1., 1, 0, 42)
((-286.94121936, 338.08336699, 17.98649935), ( 0.93791028, 0.34474578, -3.84012543e-02), 7.73415349e-02, 9.64400107e-04, 1., 1, 0, 42)
((-286.90801982, 338.09557008, 17.98514005), ( 0.95276902, 0.00681159, 3.03619490e-01), 5.00589933e-02, 9.64492129e-04, 1., 1, 0, 42)
((-286.76297212, 338.09660706, 18.03136249), ( 0.27175593, -0.7819926 , -5.60924487e-01), 9.42577641e-03, 9.64984066e-04, 1., 1, 0, 42)
((-286.57910626, 337.56752296, 17.65184965), ( 0.15038129, 0.59510205, -7.89454890e-01), 1.12465466e-02, 9.70022451e-04, 1., 1, 0, 42)
((-286.56008195, 337.64280763, 17.55197796), (-0.91359868, 0.39677523, -8.89205712e-02), 3.85248807e-03, 9.70884900e-04, 1., 1, 0, 42)
((-286.782333 , 337.7393311 , 17.53034626), (-0.55969143, 0.82637252, -6.20801998e-02), 9.61231875e-03, 9.73718545e-04, 1., 1, 0, 42)
((-286.79468138, 337.75756322, 17.52897659), (-0.55969143, 0.82637252, -6.20801998e-02), 9.61231875e-03, 9.73881241e-04, 0., 1, 0, 42)]
Filtering of tracks is also easy with the built in filter method.
There are 10 tracks in total as we simulated just 10 particles.
However we can filter these 10 particles to look at the ones that interacted with water then we could inspect the properties of tracks in certain materials.
tracks_in_zirconium_material = tracks.filter(state_filter=lambda s:s['material_id'] == 82)
# writing a separate vtk file for the tracks that go through the zirconium material
tracks_in_zirconium_material.write_to_vtk('tracks_in_zirconium_material.vtp')
tracks_in_water_material = tracks.filter(state_filter=lambda s:s['material_id'] == 42)
# writing a separate vtk file for the tracks that go through the water material
tracks_in_water_material.write_to_vtk('tracks_in_water_material.vtp')
print(f'{len(tracks_in_water_material)} tracks in water and {len(tracks_in_zirconium_material)}')
9 tracks in water and 5
This next code block might be familiar from task 3. Here, we are converting the geometry into a 3D version which can be viewed. This will provide a nice background for the tracks so we know where are relative to the materials.
If you were working with CAD geometry you could load up STL files or use mbconvert to convert a dagmc.h5m to a VTK file.
Mesh tallies (in VTK format) as you can visualize the geometry together with the source in Paraview
vox_plot = openmc.Plot()
vox_plot.type = 'voxel'
vox_plot.width = (1300., 1300., 1300.)
vox_plot.pixels = (100, 100, 100)
vox_plot.filename = 'plot_3d'
vox_plot.color_by = 'material'
vox_plot.colors = {moderating_material: 'blue', transparent_material: 'red'}
plots = openmc.Plots([vox_plot])
plots.export_to_xml()
openmc.plot_geometry()
# this reads in the h54 voxel file and writes it to a vti file
openmc.voxel_to_vtk("plot_3d.h5", "plot_3d.vti")
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| The OpenMC Monte Carlo Code
Copyright | 2011-2025 MIT, UChicago Argonne LLC, and contributors
License | https://docs.openmc.org/en/latest/license.html
Version | 0.15.3-dev144
Commit Hash | 14ab4d3b6f3d77b73e8bb480782bbe1bdd56483d
Date/Time | 2025-05-14 13:52:58
OpenMP Threads | 16
Reading model XML file 'model.xml' ...
WARNING: Other XML file input(s) are present. These files may be ignored in
favor of the model.xml file.
Preparing distributed cell instances...
Reading plot XML file...
=======================> PLOTTING SUMMARY <========================
Plot ID: 1
Plot file: plot_3d.h5
Universe depth: -1
Plot Type: Voxel
Origin: 0.0 0.0 0.0
Width: 1300.0 1300.0 1300.0
Coloring: Materials
Voxels: 100 100 100
Processing plot 1: plot_3d.h5...
'plot_3d.vti'
Right mouse click on the vtp files in the file explorer to download the vtk file to your base computer and open it with a VTK file reader such as Paraview or Visit.
Paraview can be downloaded here: https://www.paraview.org/download/. Visit can be downloaded here https://wci.llnl.gov/simulation/computer-codes/visit/downloads.
Learning Outcomes for Part 3:
Particle tracks through geometry can be tracked in OpenMC and visualised in programs such as Paraview and Visit.